API
4.2
For MATLAB, Python, Java, and C++ users
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The states, controls, dynamics, parameters, goals, and constraints for a phase of the problem. More...
Public Member Functions | |
MocoPhase () | |
Model * | setModel (std::unique_ptr< Model > model) |
Set the Model whose dynamics should be used for this phase. More... | |
Model * | setModelAsCopy (Model model) |
The model is copied into the MocoPhase; further changes made to the passed-in model will have no effect on this MocoPhase. More... | |
void | setModelProcessor (ModelProcessor model) |
Set a model processor for creating the model for this phase. More... | |
ModelProcessor & | updModelProcessor () |
Get a mutable reference to the internal ModelProcessor. More... | |
void | setTimeBounds (const MocoInitialBounds &, const MocoFinalBounds &) |
Set the bounds on the initial and final time for this phase. More... | |
void | printStateNamesWithSubstring (const std::string &name) |
Find and print the names of all state variables containing a substring. More... | |
void | setStateInfo (const std::string &name, const MocoBounds &bounds, const MocoInitialBounds &init={}, const MocoFinalBounds &final={}) |
Set information about a single state variable in this phase. More... | |
void | setStateInfoPattern (const std::string &pattern, const MocoBounds &bounds, const MocoInitialBounds &init={}, const MocoFinalBounds &final={}) |
Set information for state variables whose names match the provided regular expression. More... | |
void | printControlNamesWithSubstring (const std::string &name) |
Find and print the names of all control variables containing a substring. More... | |
void | setControlInfo (const std::string &name, const MocoBounds &, const MocoInitialBounds &={}, const MocoFinalBounds &={}) |
Set information about a single control variable in this phase. More... | |
void | setDefaultSpeedBounds (const MocoBounds &bounds) |
Set the bounds on generalized speed state variables for which explicit bounds are not set. More... | |
void | setControlInfoPattern (const std::string &pattern, const MocoBounds &, const MocoInitialBounds &={}, const MocoFinalBounds &={}) |
Set information for control variables whose names match the provided regular expression. More... | |
void | setBoundActivationFromExcitation (bool tf) |
For muscles without explicit activation bounds, set the bounds for muscle activation (if activation dynamics are enabled) from the bounds for muscle control (excitation), using min/max control if explicit control bounds are not provided. More... | |
void | setKinematicConstraintBounds (const MocoBounds &bounds) |
Set the bounds on all of the kinematic constraint equations in this phase. More... | |
void | setMultiplierBounds (const MocoBounds &bounds) |
Set the bounds on all of the Lagrange multipliers in this phase. More... | |
template<typename MocoParamType , typename... Args> | |
MocoParamType * | addParameter (Args &&... args) |
Add a parameter to this phase. More... | |
template<typename MocoParamType > | |
MocoParamType * | addParameter (std::unique_ptr< MocoParamType > param) |
template<typename MocoGoalType , typename... Args> | |
MocoGoalType * | addGoal (Args &&... args) |
Add a goal to this phase. More... | |
template<typename MocoGoalType > | |
MocoGoalType * | addGoal (std::unique_ptr< MocoGoalType > goal) |
Add a goal term to this phase. More... | |
template<typename MocoPCType , typename... Args> | |
MocoPCType * | addPathConstraint (Args &&... args) |
Add a path constraint to this phase. More... | |
template<typename MocoPCType > | |
MocoPCType * | addPathConstraint (std::unique_ptr< MocoPCType > pc) |
Add a path constraint to this phase. More... | |
const Model & | getModel () const |
Get the base model in the internal ModelProcessor. More... | |
Model & | updModel () |
Get a mutable reference to the base model in the internal ModelProcessor. More... | |
const ModelProcessor & | getModelProcessor () const |
Get the ModelProcessor. More... | |
MocoInitialBounds | getTimeInitialBounds () const |
MocoFinalBounds | getTimeFinalBounds () const |
const MocoVariableInfo & | getStateInfo (const std::string &name) const |
Access explicit state infos provided to this phase. More... | |
const MocoVariableInfo & | getControlInfo (const std::string &name) const |
Access explicit control infos provided to this phase. More... | |
const MocoBounds & | getDefaultSpeedBounds () const |
bool | getBoundActivationFromExcitation () const |
const MocoBounds & | getKinematicConstraintBounds () const |
const MocoBounds & | getMultiplierBounds () const |
const MocoParameter & | getParameter (const std::string &name) const |
MocoParameter & | updParameter (const std::string &name) |
const MocoGoal & | getGoal (const std::string &name) const |
MocoGoal & | updGoal (const std::string &name) |
const MocoPathConstraint & | getPathConstraint (const std::string &name) const |
Get a MocoPathConstraint from this MocoPhase. More... | |
MocoPathConstraint & | updPathConstraint (const std::string &name) |
Public Member Functions inherited from OpenSim::Object | |
virtual | ~Object () |
Virtual destructor for cleanup. More... | |
bool | isEqualTo (const Object &aObject) const |
Equality operator wrapper for use from languages not supporting operator overloading. More... | |
Object & | operator= (const Object &aObject) |
Copy assignment copies he base class fields, including the properties. More... | |
virtual bool | operator== (const Object &aObject) const |
Determine if two objects are equal. More... | |
virtual bool | operator< (const Object &aObject) const |
Provide an ordering for objects so they can be put in sorted containers. More... | |
void | setName (const std::string &name) |
Set the name of the Object. More... | |
const std::string & | getName () const |
Get the name of this Object. More... | |
void | setDescription (const std::string &description) |
Set description, a one-liner summary. More... | |
const std::string & | getDescription () const |
Get description, a one-liner summary. More... | |
const std::string & | getAuthors () const |
Get Authors of this Object. More... | |
void | setAuthors (const std::string &authors) |
Set Authors of this object. More... | |
const std::string & | getReferences () const |
Get references or publications to cite if using this object. More... | |
void | setReferences (const std::string &references) |
Set references or publications to cite if using this object. More... | |
int | getNumProperties () const |
Determine how many properties are stored with this Object. More... | |
const AbstractProperty & | getPropertyByIndex (int propertyIndex) const |
Get a const reference to a property by its index number, returned as an AbstractProperty. More... | |
AbstractProperty & | updPropertyByIndex (int propertyIndex) |
Get a writable reference to a property by its index number, returned as an AbstractProperty. More... | |
bool | hasProperty (const std::string &name) const |
Return true if this Object has a property of any type with the given name, which must not be empty. More... | |
const AbstractProperty & | getPropertyByName (const std::string &name) const |
Get a const reference to a property by its name, returned as an AbstractProperty. More... | |
AbstractProperty & | updPropertyByName (const std::string &name) |
Get a writable reference to a property by its name, returned as an AbstractProperty. More... | |
template<class T > | |
bool | hasProperty () const |
Return true if this Object contains an unnamed, one-object property that contains objects of the given template type T. More... | |
template<class T > | |
const Property< T > & | getProperty (const PropertyIndex &index) const |
Get property of known type Property<T> as a const reference; the property must be present and have the right type. More... | |
template<class T > | |
Property< T > & | updProperty (const PropertyIndex &index) |
Get property of known type Property<T> as a writable reference; the property must be present and have the right type. More... | |
bool | isObjectUpToDateWithProperties () const |
Returns true if no property's value has changed since the last time setObjectIsUpToDateWithProperties() was called. More... | |
void | readObjectFromXMLNodeOrFile (SimTK::Xml::Element &objectElement, int versionNumber) |
We're given an XML element from which we are to populate this Object. More... | |
virtual void | updateFromXMLNode (SimTK::Xml::Element &objectElement, int versionNumber) |
Use this method to deserialize an object from a SimTK::Xml::Element. More... | |
void | updateXMLNode (SimTK::Xml::Element &parent, const AbstractProperty *prop=nullptr) const |
Serialize this object into the XML node that represents it. More... | |
bool | getInlined () const |
Inlined means an in-memory Object that is not associated with an XMLDocument. More... | |
void | setInlined (bool aInlined, const std::string &aFileName="") |
Mark this as inlined or not and optionally provide a file name to associate with the new XMLDocument for the non-inline case. More... | |
std::string | getDocumentFileName () const |
If there is a document associated with this object then return the file name maintained by the document. More... | |
int | getDocumentFileVersion () const |
If there is a document associated with this object then return its version number. More... | |
void | setAllPropertiesUseDefault (bool aUseDefault) |
bool | print (const std::string &fileName) const |
Write this Object into an XML file of the given name; conventionally the suffix to use is ".osim". More... | |
std::string | dump () const |
dump the XML representation of this Object into an std::string and return it. More... | |
virtual bool | isA (const char *type) const |
The default implementation returns true only if the supplied string is "Object"; each Object-derived class overrides this to match its own class name. More... | |
const std::string & | toString () const |
Wrapper to be used on Java side to display objects in tree; this returns just the object's name. More... | |
PropertySet & | getPropertySet () |
OBSOLETE: Get a reference to the PropertySet maintained by the Object. More... | |
const PropertySet & | getPropertySet () const |
Static Public Member Functions | |
Auto-generated functions | |
static MocoPhase * | safeDownCast (OpenSim::Object *obj) |
For use in MATLAB and Python to access the concrete class. More... | |
Static Public Member Functions inherited from OpenSim::Object | |
static void | registerType (const Object &defaultObject) |
Register an instance of a class; if the class is already registered it will be replaced. More... | |
static void | renameType (const std::string &oldTypeName, const std::string &newTypeName) |
Support versioning by associating the current Object type with an old name. More... | |
static const Object * | getDefaultInstanceOfType (const std::string &concreteClassName) |
Return a pointer to the default instance of the registered (concrete) Object whose class name is given, or NULL if the type is not registered. More... | |
template<class T > | |
static bool | isObjectTypeDerivedFrom (const std::string &concreteClassName) |
Return true if the given concrete object type represents a subclass of the template object type T, and thus could be referenced with a T*. More... | |
static Object * | newInstanceOfType (const std::string &concreteClassName) |
Create a new instance of the concrete Object type whose class name is given as concreteClassName. More... | |
static void | getRegisteredTypenames (Array< std::string > &typeNames) |
Retrieve all the typenames registered so far. More... | |
template<class T > | |
static void | getRegisteredObjectsOfGivenType (ArrayPtrs< T > &rArray) |
Return an array of pointers to the default instances of all registered (concrete) Object types that derive from a given Object-derived type that does not have to be concrete. More... | |
static bool | PrintPropertyInfo (std::ostream &os, const std::string &classNameDotPropertyName, bool printFlagInfo=true) |
Dump formatted property information to a given output stream, useful for creating a "help" facility for registered objects. More... | |
static bool | PrintPropertyInfo (std::ostream &os, const std::string &className, const std::string &propertyName, bool printFlagInfo=true) |
Same as the other signature but the class name and property name are provided as two separate strings. More... | |
static Object * | makeObjectFromFile (const std::string &fileName) |
Create an OpenSim object whose type is based on the tag at the root node of the XML file passed in. More... | |
static const std::string & | getClassName () |
Return the name of this class as a string; i.e., "Object". More... | |
static void | setSerializeAllDefaults (bool shouldSerializeDefaults) |
Static function to control whether all registered objects and their properties are written to the defaults section of output files rather than only those values for which the default was explicitly overwritten when read in from an input file or set programmatically. More... | |
static bool | getSerializeAllDefaults () |
Report the value of the "serialize all defaults" flag. More... | |
static bool | isKindOf (const char *type) |
Returns true if the passed-in string is "Object"; each Object-derived class defines a method of this name for its own class name. More... | |
static void | setDebugLevel (int newLevel) |
Set the amount of logging output. More... | |
static int | getDebugLevel () |
Get the current setting of debug level. More... | |
static Object * | SafeCopy (const Object *aObject) |
Use the clone() method to duplicate the given object unless the pointer is null in which case null is returned. More... | |
static void | RegisterType (const Object &defaultObject) |
OBSOLETE alternate name for registerType(). More... | |
static void | RenameType (const std::string &oldName, const std::string &newName) |
OBSOLETE alternate name for renameType(). More... | |
Auto-generated functions <br> | |
static const std::string & | getClassName () |
This returns "MocoPhase" More... | |
MocoPhase * | clone () const override |
Create a new heap-allocated copy of the concrete object to which this Object refers. More... | |
const std::string & | getConcreteClassName () const override |
Returns the class name of the concrete Object-derived class of the actual object referenced by this Object, as a string. More... | |
The states, controls, dynamics, parameters, goals, and constraints for a phase of the problem.
The dynamics are provided by the OpenSim Model.
This class allows you to define your problem, but does not let you do anything with your problem (this class only contains user input). Use MocoProblem::createRep() to create an instance of MocoProblemRep, which provides additional functionality.
OpenSim::MocoPhase::MocoPhase | ( | ) |
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Add a goal to this phase.
Goal must have a name (MocoGoal::setName()), and the name must be unique. Note that goals have the name "goal" by default, so if you only have one goal, you don't need to set its name manually. C++ example:
You can edit the goal using the returned pointer. Python example:
Matlab example:
In both Python and Matlab, changes to goal
will affect your problem.
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Add a goal term to this phase.
Similar to above.
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Add a parameter to this phase.
Parameter variables must have a name (MocoParameter::setName()), and the name must be unique. Note that parameters have the name "parameter" by default, but choosing a more appropriate name is recommended. C++ example:
You can edit the parameter using the returned pointer. Python example:
Matlab example:
In both Python and Matlab, changes to param
will affect your problem.
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Add a path constraint to this phase.
Path constraints must have a name (MocoPathConstraint::setName()), and the name must be unique. Note that path constraints have the name "path_constraint" by default, so if you only have one path constraint, you don't need to set its name manually. C++ example:
You can edit the constraint using the returned pointer. Python example:
Matlab example:
In both Python and Matlab, changes to pc
will affect your problem.
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Add a path constraint to this phase.
Similar to above.
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inlineoverridevirtual |
Create a new heap-allocated copy of the concrete object to which this Object refers.
It is up to the caller to delete the returned object when no longer needed. Every concrete object deriving from Object implements this pure virtual method automatically, via the declaration macro it invokes (e.g., OpenSim_DECLARE_CONCRETE_OBJECT()). Note that the concrete class overrides modify the return type to be a pointer to the concrete object; that still overrides the base class method because the return type is covariant with (that is, derives from) Object.
Implements OpenSim::Object.
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inlinestatic |
This returns "MocoPhase"
See getConcreteClassName() if you want the class name of the underlying concrete object instead.
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inlineoverridevirtual |
Returns the class name of the concrete Object-derived class of the actual object referenced by this Object, as a string.
This is the string that is used as the tag for this concrete object in an XML file. Every concrete class derived from Object automatically overrides this method via the declaration macro it uses. See getClassName() to get the class name of the referencing (possibly abstract) class rather than the concrete object.
Implements OpenSim::Object.
const MocoVariableInfo& OpenSim::MocoPhase::getControlInfo | ( | const std::string & | name | ) | const |
Access explicit control infos provided to this phase.
Default bounds are obtained from the model. This function does not provide such automatically-populated bounds from the model. For that, use see MocoProblemRep::getControlInfo().
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const MocoGoal& OpenSim::MocoPhase::getGoal | ( | const std::string & | name | ) | const |
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Get the base model in the internal ModelProcessor.
This throws an exception if the ModelProcessor does not have a base model. By default, the model is an empty model.
References OpenSim::ModelComponent::getModel().
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Get the ModelProcessor.
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const MocoParameter& OpenSim::MocoPhase::getParameter | ( | const std::string & | name | ) | const |
const MocoPathConstraint& OpenSim::MocoPhase::getPathConstraint | ( | const std::string & | name | ) | const |
Get a MocoPathConstraint from this MocoPhase.
Note: this does not include MocoKinematicConstraints, use getKinematicConstraint() instead.
const MocoVariableInfo& OpenSim::MocoPhase::getStateInfo | ( | const std::string & | name | ) | const |
Access explicit state infos provided to this phase.
For some state variables, default bounds are obtained from the model. This function does not provide such automatically-populated bounds from the model. For that, use see MocoProblemRep::getStateInfo().
MocoFinalBounds OpenSim::MocoPhase::getTimeFinalBounds | ( | ) | const |
Note: the return value is constructed fresh on every call from the internal property. Avoid repeated calls to this function.
MocoInitialBounds OpenSim::MocoPhase::getTimeInitialBounds | ( | ) | const |
Note: the return value is constructed fresh on every call from the internal property. Avoid repeated calls to this function.
void OpenSim::MocoPhase::printControlNamesWithSubstring | ( | const std::string & | name | ) |
Find and print the names of all control variables containing a substring.
void OpenSim::MocoPhase::printStateNamesWithSubstring | ( | const std::string & | name | ) |
Find and print the names of all state variables containing a substring.
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inlinestatic |
For use in MATLAB and Python to access the concrete class.
Example: cObj = MocoPhase.safeDownCast(obj)
. This is equivalent to dynamic_cast<MocoPhase*>(obj)
in C++.
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For muscles without explicit activation bounds, set the bounds for muscle activation (if activation dynamics are enabled) from the bounds for muscle control (excitation), using min/max control if explicit control bounds are not provided.
Default: true.
void OpenSim::MocoPhase::setControlInfo | ( | const std::string & | name, |
const MocoBounds & | , | ||
const MocoInitialBounds & | = {} , |
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const MocoFinalBounds & | = {} |
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Set information about a single control variable in this phase.
Similar to setStateInfo(). The name for a control is the path to the associated actuator (e.g., "/forceset/soleus_r"). If setting a control info for an actuator with multiple controls, the name should be the actuator path appended by the control index (e.g. "/actuator_0"); If info is not specified for a ScalarActuator (or if only the initial and/or final bounds are provided), the actuator's min and max control are used for the bounds over the phase. By default, non-ScalarActuators are unconstrained.
void OpenSim::MocoPhase::setControlInfoPattern | ( | const std::string & | pattern, |
const MocoBounds & | , | ||
const MocoInitialBounds & | = {} , |
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const MocoFinalBounds & | = {} |
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Set information for control variables whose names match the provided regular expression.
You can use this to set bounds for all muscle activations, etc. Infos provided via setControlInfoPattern() take precedence over the default values from the model. Infos provided via setControlInfo() take precedence over infos provided with setControlInfoPattern(). If a state variable name matches multiple patterns, the info provided with the last pattern is used for that control variable.
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Set the bounds on generalized speed state variables for which explicit bounds are not set.
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Set the bounds on all of the kinematic constraint equations in this phase.
When creating a MocoProblemRep, these bounds are used to create MocoConstraintInfo's for each kinematic constraint equation in the phase.
void OpenSim::MocoPhase::setModelProcessor | ( | ModelProcessor | model | ) |
Set a model processor for creating the model for this phase.
Use this to provide a model as a .osim file.
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Set the bounds on all of the Lagrange multipliers in this phase.
When creating a MocoProblemRep, these bounds are used to create MocoVariableInfos for each Lagrange multiplier in the phase.
void OpenSim::MocoPhase::setStateInfo | ( | const std::string & | name, |
const MocoBounds & | bounds, | ||
const MocoInitialBounds & | init = {} , |
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const MocoFinalBounds & | final = {} |
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Set information about a single state variable in this phase.
name | The name must match the path of a state variable in the model (e.g., /hip/flexion/value or /hip/flexion/speed ). |
bounds | The bounds on this state variable over the entire phase. If default-constructed ({} ), then either the variable is unconstrained or default bounds are used (see below). |
init | The bounds on this state variable at the start of the phase. By default, there are no additional bounds on the initial value (though the bounds over the entire phase still apply to the initial value). |
final | Similar to init but for the value at the end of the phase. |
For all bounds arguments: if you want to constrain to a single value, pass that single value. If you want to constrain to a range, pass the lower and upper bounds to the constructor as two arguments.
statebounds_<state-name>
, then this output is used to set default bounds for the state variable <state-name>
for that component. The first element of the Vec2 is the lower bound and the second is the upper bound.These defaults are also used if you completely omit state info for a state variable.
For states with default bounds, if you actually want a variable to be unconstrained, pass in MocoBounds::unconstrained().
Set bounds over the entire phase, but do not specify additional bounds on the value at the start and end of the phase.
Allow any value throughout the phase (within the coordinate's range), but the initial value is 5.
Constrain the initial and final state to a single value of 0, but use default speed bounds elsewhere.
Make a coordinate value unconstrained.
This function will overwrite any info that has previously been set for this state variable.
void OpenSim::MocoPhase::setStateInfoPattern | ( | const std::string & | pattern, |
const MocoBounds & | bounds, | ||
const MocoInitialBounds & | init = {} , |
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const MocoFinalBounds & | final = {} |
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) |
Set information for state variables whose names match the provided regular expression.
You can use this to set bounds for all muscle activations, etc. Infos provided via setStateInfoPattern() take precedence over the default values from the model. Infos provided via setStateInfo() take precedence over infos provided with setStateInfoPattern(). If a state variable name matches multiple patterns, the info provided with the last pattern is used for that state variable.
void OpenSim::MocoPhase::setTimeBounds | ( | const MocoInitialBounds & | , |
const MocoFinalBounds & | |||
) |
Set the bounds on the initial and final time for this phase.
If you want to constrain the initial time to a single value, pass that value to the constructor of MocoInitialBounds. If you want the initial time to fall within a range, pass the lower and upper bounds to the constructor of MocoInitialBounds. Likewise for MocoFinalBounds. This will overwrite bounds that were set previously, if any.
MocoGoal& OpenSim::MocoPhase::updGoal | ( | const std::string & | name | ) |
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Get a mutable reference to the base model in the internal ModelProcessor.
This throws an exception if the ModelProcessor does not have a base model. By default, the model is an empty model.
References OpenSim::ModelComponent::updModel().
ModelProcessor& OpenSim::MocoPhase::updModelProcessor | ( | ) |
Get a mutable reference to the internal ModelProcessor.
Use this to set the processor's base model or to add operators to the processor.
MocoParameter& OpenSim::MocoPhase::updParameter | ( | const std::string & | name | ) |
MocoPathConstraint& OpenSim::MocoPhase::updPathConstraint | ( | const std::string & | name | ) |